Hits networkx

NetworkX latest. Source code for networkx. BSD license. The HITS algorithm computes two numbers for a node. Authorities estimates the node value based on the incoming links. Hubs estimates the node value based on outgoing links. Returns hubs,authorities : two-tuple of dictionaries Two dictionaries keyed by node containing the hub and authority values. Raises PowerIterationFailedConvergence If the algorithm fails to converge to the specified tolerance within the specified number of iterations of the power iteration method.

The HITS algorithm was designed for directed graphs but this algorithm does not check if the input graph is directed and will execute on undirected graphs. References Langville and C. Meyer, "A survey of eigenvector methods of web information retrieval.

MultiDiGraph : raise Exception "hits not defined for graphs with multiedges. The eigenvector calculation is done by the power iteration method and has no guarantee of convergence. Read the Docs v: latest Versions latest warning nodeiter api2.GitHub is home to over 40 million developers working together to host and review code, manage projects, and build software together.

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Already on GitHub? Sign in to your account. Is this the reason? And how to solve in this case? It seems it cannot simply solved by replacing a function. I'm having the same issue.

I changed the number of iterations tokeeping the learning rate at 0. Any idea what parameters I might have to change to solve this? Pay special attention to the words in bold. Skip to content.

hits networkx

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Introduction to Networkx-2

Stack Overflow for Teams is a private, secure spot for you and your coworkers to find and share information. I was wondering how can we can use the python module networkX to implement SimRank to compare the similarity of 2 nodes? SimRank is included in the library. SimRank is a vertex similarity measure. It computes the similarity between two nodes on a graph based on the topology, i.

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To illustrate SimRank, let's consider the following graph, in which abc connect to each other, and d is connected to d. How a node a is similar to a node dis based on how a 's neighbor nodes, b and csimilar to d 's neighbors, c. As seen, this is a recursive definition. Thus, SimRank is recursively computed until the similarity values converges. Note that SimRank introduces a constant r to represents the relative importance between in-direct neighbors and direct neighbors.

The formal equation of SimRank can be found here. The return value sim is a dictionary of dictionary of float. To access the similarity between node a and node b in graph Gone can simply access sim[a][b].

HITS algorithm

Let's verify the result by calculating similarity between, say, node a and node bdenoted by S a,b. Jeh and J. SimRank: a measure of structural-context similarity. In KDD'02 pages ACM Press, If you were to add this to networkx, you could shorten the code given by user by using numpy and itertools :.

Then, taking the toy example from the SimRank paper University graphreproduces the paper results:. Learn more. Calculating SimRank using NetworkX?

hits networkx

Ask Question. Asked 8 years, 1 month ago. Active 6 months ago. Viewed 7k times. Examples, tutorials are welcomed too! Hooked DjangoRocks DjangoRocks 8, 6 6 gold badges 32 32 silver badges 50 50 bronze badges. Active Oldest Votes. For more details, you may want to checkout the following paper: G. This implementation is not accurate.This algorithm is used to the web link-structures to discover and rank the webpages relevant for a particular search.

HITS uses hubs and authorities to define a recursive relationship between webpages. This would be visualized with reference to the above Graph. If you like GeeksforGeeks and would like to contribute, you can also write an article using contribute.

See your article appearing on the GeeksforGeeks main page and help other Geeks. Please Improve this article if you find anything incorrect by clicking on the "Improve Article" button below. Writing code in comment? Please use ide. Given a query to a Search Engine, the set of highly relevant web pages are called Roots. They are potential Authorities.

Pages which are not very relevant but point to pages in the Root are called Hubs. Thus, an Authority is a page that many hubs link to whereas a Hub is a page that links to many authorities. The in-built hits function returns two dictionaries keyed by nodes.

Check out this Author's contributed articles. Load Comments.The idea behind Hubs and Authorities stemmed from a particular insight into the creation of web pages when the Internet was originally forming; that is, certain web pages, known as hubs, served as large directories that were not actually authoritative in the information that they held, but were used as compilations of a broad catalog of information that led users direct to other authoritative pages.

In other words, a good hub represents a page that pointed to many other pages, while a good authority represents a page that is linked by many different hubs. The scheme therefore assigns two scores for each page: its authority, which estimates the value of the content of the page, and its hub value, which estimates the value of its links to other pages.

Many methods have been used to rank the importance of scientific journals. One such method is Garfield's impact factor. Journals such as Science and Nature are filled with numerous citations, making these magazines have very high impact factors. Thus, when comparing two more obscure journals which have received roughly the same number of citations but one of these journals has received many citations from Science and Naturethis journal needs be ranked higher.

In other words, it is better to receive citations from an important journal than from an unimportant one. This phenomenon also occurs in the Internet. Counting the number of links to a page can give us a general estimate of its prominence on the Web, but a page with very few incoming links may also be prominent, if two of these links come from the home pages of sites like Yahoo!

Because these sites are of very high importance but are also search enginesa page can be ranked much higher than its actual relevance.

networkx.hits

In the HITS algorithm, the first step is to retrieve the most relevant pages to the search query. This set is called the root set and can be obtained by taking the top pages returned by a text-based search algorithm. A base set is generated by augmenting the root set with all the web pages that are linked from it and some of the pages that link to it.

The web pages in the base set and all hyperlinks among those pages form a focused subgraph. The HITS computation is performed only on this focused subgraph. According to Kleinberg the reason for constructing a base set is to ensure that most or many of the strongest authorities are included.

Authority and hub values are defined in terms of one another in a mutual recursion. An authority value is computed as the sum of the scaled hub values that point to that page. A hub value is the sum of the scaled authority values of the pages it points to. Some implementations also consider the relevance of the linked pages. However it does have some major differences:. That is, a page's authority score is the sum of all the hub scores of pages that point to it.

That is, a page's hub score is the sum of all the authority scores of pages it points to. The final hub-authority scores of nodes are determined after infinite repetitions of the algorithm. As directly and iteratively applying the Hub Update Rule and Authority Update Rule leads to diverging values, it is necessary to normalize the matrix after every iteration. Thus the values obtained from this process will eventually converge.

The code below does not converge, because it is necessary to limit the number of steps that the algorithm runs for. One way to get around this, however, would be to normalize the hub and authority values after each "step" by dividing each authority value by the square root of the sum of the squares of all authority values, and dividing each hub value by the square root of the sum of the squares of all hub values.

This is what the pseudocode above does. From Wikipedia, the free encyclopedia. Cambridge University Press. Retrieved Cornell University. Categories : Link analysis. Hidden categories: CS1 maint: uses authors parameter Articles with example pseudocode. Namespaces Article Talk. Views Read Edit View history. By using this site, you agree to the Terms of Use and Privacy Policy.By using our site, you acknowledge that you have read and understand our Cookie PolicyPrivacy Policyand our Terms of Service.

The dark mode beta is finally here. Change your preferences any time. Stack Overflow for Teams is a private, secure spot for you and your coworkers to find and share information. Following which I wish to sort in descending order the hub score of the nodes in the graph. Did you read the docstring for the function? Learn more. Ask Question. Asked 2 years, 11 months ago. Active 2 years, 11 months ago.

Viewed times. Jovi Dsilva. Jovi Dsilva Jovi Dsilva 11 11 bronze badges. Active Oldest Votes. The HITS algorithm was designed for directed graphs but this algorithm does not check if the input graph is directed and will execute on undirected graphs. So yes, you can use it.

hits networkx

What if the graph has weighted edges?. In the NetworkX implementation of PageRank you can specify the attribute for weights. Its not mentioned in the documentation. Read the source code in the link I provided. Set the "weight" attribute on edges of your graph. And perhaps you can submit a pull request to clarify the documentation.

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hits networkx

Skip to content. Permalink Dismiss Join GitHub today GitHub is home to over 40 million developers working together to host and review code, manage projects, and build software together. Sign up. Branch: master. Find file Copy path. Cannot retrieve contributors at this time.

Raw Blame History. The HITS algorithm computes two numbers for a node. Authorities estimates the node value based on the incoming links. Hubs estimates the node value based on outgoing links. Returns hubs,authorities : two-tuple of dictionaries Two dictionaries keyed by node containing the hub and authority values. Raises PowerIterationFailedConvergence If the algorithm fails to converge to the specified tolerance within the specified number of iterations of the power iteration method.

The HITS algorithm was designed for directed graphs but this algorithm does not check if the input graph is directed and will execute on undirected graphs.

References Langville and C. Meyer, "A survey of eigenvector methods of web information retrieval. MultiDiGraph : raise Exception "hits not defined for graphs with multiedges. The eigenvector calculation is done by the power iteration method and has no guarantee of convergence. You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. A NetworkX graph. Maximum number of iterations in power method. Error tolerance used to check convergence in power method iteration.

Starting value of each node for power method iteration. Normalize results by the sum of all of the values. Two dictionaries keyed by node containing the hub and authority.


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